BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023D09SP1|AL428050
(952 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1782 1841 0.0
>3x_Contig1782
Length = 24703
Score = 1841 bits (924), Expect = 0.0
Identities = 945/954 (99%), Gaps = 2/954 (0%)
Strand = Plus / Minus
Query: 1 gatccagagtcagaawctgacgaaattaaggaaccagaatctgaactgacaagaccagtt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 20036 gatccagagtcagaatctgacgaaattaaggaaccagaatctgaactgacaagaccagtt 19977
Query: 61 agtggaatagaggcatcaatgtacgatgaaagctgttttaatgctgttacatcgttattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19976 agtggaatagaggcatcaatgtacgatgaaagctgttttaatgctgttacatcgttattg 19917
Query: 121 taaatgacactggaagagttcaaaatctgcgcttgaagagtcgagacagaatcttctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19916 taaatgacactggaagagttcaaaatctgcgcttgaagagtcgagacagaatcttctggg 19857
Query: 181 aaatatacttttgcaacagtgacaaggtaatctaaacttgtaacctttaatggaactaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19856 aaatatacttttgcaacagtgacaaggtaatctaaacttgtaacctttaatggaactaac 19797
Query: 241 tccaaaactgaagtattatcgaatttttgggccccattgaagggatagttcaaaaccttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19796 tccaaaactgaagtattatcgaatttttgggccccattgaagggatagttcaaaaccttt 19737
Query: 301 ggcaaaaattcaaaaatttgagcgttagaaacgggattgttgacagtaaatggataattc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19736 ggcaaaaattcaaaaatttgagcgttagaaacgggattgttgacagtaaatggataattc 19677
Query: 361 aactccttcttgaatccaacggtaattagcgtatatcctgcaggttgcacaatttcagtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19676 aactccttcttgaatccaacggtaattagcgtatatcctgcaggttgcacaatttcagtg 19617
Query: 421 gcagctgtaatagcttgaggcaatgtttcagtagcgatctttgaagatgtggtagatgta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19616 gcagctgtaatagcttgaggcaatgtttcagtagcgatctttgaagatgtggtagatgta 19557
Query: 481 gattgagtaccagatgtttcgaattctgctaccatggtagtaggcaaccaaacttgttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19556 gattgagtaccagatgtttcgaattctgctaccatggtagtaggcaaccaaacttgttgt 19497
Query: 541 gttgtggacactggctgctctgtagtagtggaaggtagtgaaacaactggttcaacggta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19496 gttgtggacactggctgctctgtagtagtggaaggtagtgaaacaactggttcaacggta 19437
Query: 601 gaaactacggaagtgcttccaacctggcttgtacttgatgatggttcttcaattggtttg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19436 gaaactacggaagtgcttccaacctggcttgtacttgatgatggttcttcaattggtttg 19377
Query: 661 gtaacaatgcttggaagtgatgtagtagcacttgttggagccaatgtctcagtatctgtt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19376 gtaacaatgcttggaagtgatgtagtagcacttgttggagccaatgtctcagtatctgtt 19317
Query: 721 gatggagcagatgtactaaccactgtttctgatgagacaacatcttgagatggaggtaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19316 gatggagcagatgtactaaccactgtttctgatgagacaacatcttgagatggaggtaac 19257
Query: 781 actgatgaagagatttgaatgtcatcagtagcccatggttcagaagtcgataaagtttca 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 19256 actgatgaagagatttgaatgtcatcagtagcccatggttcagaagtcgataaagtttca 19197
Query: 841 attggcaatgatgatgtttccyccgtgagratagtactggttg-argsyctggaatagat 899
||||||||||||||||||||| ||||||| ||||||||||||| | | |||||||||||
Sbjct: 19196 attggcaatgatgatgtttcctccgtgaggatagtactggttgaaggctctggaatagat 19137
Query: 900 tctgaggtactgctttctggtagagg-tccaaactagtagtgcttaatggratt 952
|||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 19136 tctgaggtactgctttctggtagaggttccaaactagtagtgcttaatggaatt 19083
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6993
Number of Sequences: 1807
Number of extensions: 6993
Number of successful extensions: 62
Number of sequences better than 1.0e-20: 1
length of query: 952
length of database: 10,358,551
effective HSP length: 16
effective length of query: 936
effective length of database: 10,329,639
effective search space: 9668542104
effective search space used: 9668542104
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)